BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035G02SP1|AL430103
(887 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1228 1753 0.0
>3x_Contig1228
Length = 5992
Score = 1753 bits (883), Expect = 0.0
Identities = 885/887 (99%)
Strand = Plus / Plus
Query: 1 gatctgaatttgtttctgtggaagtaatgcaatccgcatggaacaacatgaacttccatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3676 gatctgaatttgtttctgtggaagtaatgcaatccgcatggaacaacatgaacttccatc 3735
Query: 61 gttggatcagctgctgcagcacctagtgccataatagcgacaccagcctttaatggtaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3736 gttggatcagctgctgcagcacctagtgccataatagcgacaccagcctttaatggtaga 3795
Query: 121 agcgaaggtctatcgtgagaaccgccttcggggaagataccgacacagcctcttgtgtgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3796 agcgaaggtctatcgtgagaaccgccttcggggaagataccgacacagcctcttgtgtgc 3855
Query: 181 aaatggttaaacacattttcgaacactttcgagttatcgatcttttcagcgtataagaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3856 aaatggttaaacacattttcgaacactttcgagttatcgatcttttcagcgtataagaac 3915
Query: 241 gatgttggtttcgatacacagttttttacccggttgttatcagggaacggtttcctcaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3916 gatgttggtttcgatacacagttttttacccggttgttatcagggaacggtttcctcaac 3975
Query: 301 cttatcgtttcatcatcgacaactgtttcaatttgagcgctaccaatgtaacctggcaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3976 cttatcgtttcatcatcgacaactgtttcaatttgagcgctaccaatgtaacctggcaat 4035
Query: 361 ccgatcaacgatttcggagtgaaatgagaagtagctcgtactggtccttcaaaagacatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4036 ccgatcaacgatttcggagtgaaatgagaagtagctcgtactggtccttcaaaagacatc 4095
Query: 421 aatttgaccaaagtcggatcagaatcatagtttggaatataaagcttgaagtgtgaggcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4096 aatttgaccaaagtcggatcagaatcatagtttggaatataaagcttgaagtgtgaggcc 4155
Query: 481 acaggtgcgagattatcctgaactctaggaaccggaattgcaccggtccaagatccaaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4156 acaggtgcgagattatcctgaactctaggaaccggaattgcaccggtccaagatccaaac 4215
Query: 541 aatcccacaaatctattgttcttcatcgaaccttcagcggtaacaaagcacgtctgtwtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 4216 aatcccacaaatctattgttcttcatcgaaccttcagcggtaacaaagcacgtctgtttt 4275
Query: 601 gaacgagagccagtaatcttcctagtctgcgacatgactaaacaagcgtcaatgaattga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4276 gaacgagagccagtaatcttcctagtctgcgacatgactaaacaagcgtcaatgaattga 4335
Query: 661 ttcgcatgtggtgcacacacaaggatcgttggggtattttttgtggggacatggtacgaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4336 ttcgcatgtggtgcacacacaaggatcgttggggtattttttgtggggacatggtacgaa 4395
Query: 721 ccacggacttgaatctctctgaaaaaaatcgtgaatactatatcgaagatgaacaccgct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4396 ccacggacttgaatctctctgaaaaaaatcgtgaatactatatcgaagatgaacaccgct 4455
Query: 781 acatcgtatagccacgatctaaacgtatacttcttaccggtatagtcattacggtaattc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4456 acatcgtatagccacgatctaaacgtatacttcttaccggtatagtcattacggtaattc 4515
Query: 841 gaatcaacatgaggkatcttagctgccatgattggccttattcctcc 887
|||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 4516 gaatcaacatgaggtatcttagctgccatgattggccttattcctcc 4562
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5172
Number of Sequences: 1807
Number of extensions: 5172
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 887
length of database: 10,358,551
effective HSP length: 16
effective length of query: 871
effective length of database: 10,329,639
effective search space: 8997115569
effective search space used: 8997115569
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)